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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs1929340 chr9:32299078 T/G MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot
UCEC rs1929341 chr9:32301678 C/T MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot
UCEC rs1929342 chr9:32301857 A/T MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot
UCEC rs1929343 chr9:32316694 T/C MYF5 chr12:81110691-81113452:+ -0.5 -7.15 3.4E-11 Box Plot
UCEC rs1929344 chr9:32316809 T/C MYF5 chr12:81110691-81113452:+ -0.5 -7.15 3.4E-11 Box Plot
UCEC rs1949174 chr6:127873863 T/C STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot
UCEC rs1960943 chr9:32290751 T/C MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot
UCEC rs1975622 chr8:6460188 A/G MTMR9 chr8:11141925-11185655:+ 0.68 7.59 3.01E-12 Box Plot
UCEC rs1980060 chr6:127867668 T/A STXBP3 chr1:109289296-109352148:+ 0.47 6.97 9.07E-11 Box Plot
UCEC rs199513 chr17:44856932 A/G LRRC37A4 chr17:43578685-43595516:- 0.57 6.92 1.2E-10 Box Plot
UCEC rs199535 chr17:44822662 A/G LOC644172 chr17:43677491-43679748:- 0.69 7.02 6.74E-11 Box Plot
UCEC rs199535 chr17:44822662 A/G LRRC37A4 chr17:43578685-43595516:- -0.64 -7.65 2.17E-12 Box Plot
UCEC rs199600662 chr9:3708601 C/CT MYF5 chr12:81110691-81113452:+ 0.5 8.59 9.46E-15 Box Plot
UCEC rs199654634 chr9:32285731 A/ATATATATGTGTATG MYF5 chr12:81110691-81113452:+ -0.55 -7.58 3.2E-12 Box Plot
UCEC rs1999367 chr9:32304981 A/T MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot